\documentclass[thesis_guide.tex]{subfiles}
% chktex-file 1 chktex-file 46

\begin{document}

%==============================================================================
\chapter{Plots with \Package{\TikZ}}%
\label{sec:app:tikz}
%==============================================================================

\LaTeX\ file: \href{run:./guide_appendix_tikz.tex}{guide\_appendix\_tikz.tex}\\[1ex]
\noindent
\Cref{fig:tikz:syst} shows how you can produce a plot showing
the contributions of many different systematic uncertainties to a
result.
The code to produce this figure can be found in the File
\href{../tikz/zeus_Ds_systematics.tex}{tikz/zeus\_Ds\_systematics.tex}.
This in turn reads in data from
\href{../tikz/BRANCHINGSTRANGE0.dat}{tikz/BRANCHINGSTRANGE0.dat},
\href{../tikz/BRANCHINGSTRANGE1.dat}{tikz/BRANCHINGSTRANGE1.dat} and
\href{../tikz/BRANCHINGSTRANGE_titles.dat}{tikz/BRANCHINGSTRANGE\_titles.dat}

\begin{figure}[htbp]
  \centering
  \subfile{../tikz/zeus_Ds_systematics.tex}
  \caption[Strange $D^{**}$ systematics, fragmentation fractions]{The
    results of strange excited charm meson fragmentation fraction and
    branching ratio with systematic variations.  The individual
    systematic variations are put into groups $\delta_1-\delta_5$.}%
  \label{fig:tikz:syst}
\end{figure}

\end{document}
